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LLCs & Self-EmploymentLesson 3 of 410 min read

How LLCs are taxed (pass-through, self-employment tax, S-corp election)

Why your LLC doesn't pay taxes (you do), where the 15.3% self-employment tax comes from, how quarterly payments work, and the S-corp election everyone on the internet oversells.

Quick recap of the big idea from lesson 1: the IRS doesn't have an LLC tax. So how does the money you earn through an LLC get taxed? Short answer: it flows straight onto your personal tax return, picks up an extra 15.3% tax along the way, and arrives on a quarterly schedule nobody warned you about. Let's walk the whole path of a freelance dollar.

Pass-through: the business doesn't pay, you do

By default, a single-owner LLC is what the IRS calls a "disregarded entity" — for taxes, it's as if the LLC isn't there. The profit passes through to your personal return. This is pass-through taxation, and it works in three steps:

  1. Schedule C — a form attached to your regular tax return. Income at the top, business expenses below, net profit at the bottom.
  2. That profit is taxed as ordinary income, using the same brackets as any job.
  3. It also gets hit with self-employment tax — the part that shocks every first-year freelancer.

One crucial mechanic: you're taxed on profit, not on what you pay yourself. If your LLC earns $60,000 and you only transfer $35,000 to your personal checking, you still owe tax on $60,000. Moving money from the business account to yourself (an "owner's draw") is a non-event to the IRS — like moving cash between pockets.

The 15.3%: self-employment tax

Remember from the W-2 vs 1099 lesson that every employee pays 7.65% in FICA — and the employer quietly matches it. When you're self-employed, you're both. The combined self-employment tax is 15.3% of your net earnings:

PieceRateFunds
Social Security (both halves)12.4%Retirement & disability benefits
Medicare (both halves)2.9%Health coverage for people 65+
Total15.3%

This applies on top of regular income tax, and it starts from nearly the first dollar of profit — long before income tax kicks in. Two small mercies: the tax is computed on 92.35% of your profit (a built-in adjustment), and you get to deduct half of the SE tax from your taxable income. Together they soften the blow slightly — but plan around 15.3% and let the softening be a pleasant surprise.

Nobody withholds, so you pay quarterly

At a job, withholding drips your taxes to the IRS every payday. Self-employed, you are the withholding department. The IRS expects quarterly estimated payments — four deadlines (roughly April 15, June 15, September 15, and January 15) — and charges an underpayment penalty if you wait and pay it all in April, even if you pay in full.

The simple system that works:

  1. Open a separate savings account labeled "taxes."
  2. Move 25–30% of every client payment into it, immediately and unemotionally.
  3. Each quarter, pay the IRS from that account (online at IRS Direct Pay in about five minutes).

The S-corp election: real, useful, oversold

Social media's favorite "tax hack" is electing S-corporation status for your LLC. It's real — and it's profitable only at the right income level. Here's the plain-English version.

An S-corp election is a form you file with the IRS that changes how your LLC is taxed (the LLC itself stays the same state entity). After electing:

  • You must put yourself on payroll and pay yourself a reasonable salary — roughly what you'd pay someone else to do your job. The salary gets FICA taxes, just like any paycheck.
  • Profit above the salary passes through to you without the 15.3% self-employment tax.

The catch is the word reasonable. You can't earn $100,000 doing full-time consulting and pay yourself a $20,000 salary — the IRS audits exactly this, and "whatever makes my taxes lowest" is not a defensible number.

Keep the momentum — these connect to what you just read.